How this chapter is organized?

R Base Graphs

1. R Base Plots
   • Creating and Saving Graphs in R
   • Generic plot types in R
   • Scatter Plots
   • Scatter Plot Matrices
   • Box Plots
   • Strip Charts: 1-D scatter Plots
   • Bar Plots
   • Line Plots
   • Pie Charts
   • Histogram and Density Plots
   • Dot Charts
   • Plot Group Means and Confidence Intervals
2. R Base Graphical Parameters
   • Add and customize titles
   • Add and customize legends
   • Add texts
   • Add straight lines: vertical, horizontal and regression lines
   • Add an axis
   • Change axis scale: minimum, maximum and log scale
   • Customize tick mark labels
   • Change point shapes
   • Change line types
   • Change colors

Read more: —>R base Graphs.

Lattice Graphs

• xyplot(): Scatter plot
• cloud(): 3D scatter plot
• Box plot, Dot plot, Strip plot
• Density plot and Histogram

Read more: —>Lattice Graphs.

Ggplot2

1. ggplots
   • qplot(): Quick plot with ggplot2
   • Box plots
   • Violin plots
   • Dot plots
   • Stripcharts
   • Density plots
   • Histogram plots
   • Scatter plots
   • Bar plots
   • Line plots
   • Error bars
   • Pie chart
   • QQ plots
   • ECDF plots

2. ggsave(): Save a ggplot

3. ggplot2 Graphical Parameters
   • Main title, axis labels and legend title
   • Legend position and appearance
   • Change colors automatically and manually
   • Point shapes, colors and size
   • Add text annotations to a graph
   • Line types
   • Themes and background colors
   • Axis scales and transformations
   • Axis ticks: customize tick marks and labels, reorder and select items
   • Add straight lines to a plot: horizontal, vertical and regression lines
   • Rotate a plot: flip and reverse
   • Faceting: split a plot into a matrix of panels
4. Cheat Sheets
   • Be Awesome in ggplot2: A Practical Guide to be Highly Effective

Read more: —>ggplot2 essentials.

3D Graphics

3d scatter plot rgl

1. Static 3D Scatter Plots
   • Simple 3D Scatter Plots: scatterplot3d Package
   • Advanced 3D Graphs: plot3D Package
2. Interactive 3D Graphs
   • Interactive 3D Scatter Plots
   • Guide to RGL 3D Visualization System

Read more: —>3D Graphics.

Others

• The Elements of Choosing Colors for Great Data Visualization in R

Infos

This analysis has been performed using R statistical software (ver. 3.2.4).